Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8098

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8097: 16465 - KOG0118 FOG RRM domain, at 413277 to 414722 16465 mRNA_8098: 16466 - Hypothetical Protein, at 415217 to 416223 16466 mRNA_8099: 16467 - HMMPfam-SUR7/PalI family-PF06687, at 416888 to 417757 16467

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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414,344 + 16465 mRNA_8097 0.74 0.4
414,356 + 16465 mRNA_8097 0.75 0.0
414,632 - 2.0
414,958 + 0.3
415,075 - -0.3
415,378 + 16466 mRNA_8098 0.16 1.1
415,393 + 16466 mRNA_8098 0.17 -0.0
415,645 - 16466 mRNA_8098 0.43 1.5
415,936 - 16466 mRNA_8098 0.71 0.2
416,125 + -0.2
416,323 - 0.4
416,324 + 1.2
416,337 - 0.5
416,402 + 0.2
416,414 + 0.4
416,426 + -0.4
416,454 - 0.8
416,509 + -0.1
416,511 - -0.9
416,531 - 0.2
416,543 - 1.8
416,562 - 2.7
416,563 - -0.1
416,568 + 1.9
416,576 + 1.5
416,578 - -0.1
416,591 + 0.1
416,700 + 1.3
416,702 - 0.6
416,718 - 1.3
416,862 + 2.9
416,875 - 0.5
417,005 + 16467 mRNA_8099 0.13 -0.3