Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8089

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8088: 16456 - Hypothetical Protein, at 392767 to 393298 16456 mRNA_8089: 16457 - Hypothetical Protein, at 393616 to 394916 16457 mRNA_8090: 16458 - K12737 SDCCAG10 peptidyl-prolyl cis-trans isomerase SDCCAG10, at 395084 to 397372 16458

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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393,678 - 0.4
394,405 - 16457 mRNA_8089 0.61 0.0
394,408 - 16457 mRNA_8089 0.61 -0.6
394,697 + 16457 mRNA_8089 0.83 0.1
394,745 - 16457 mRNA_8089 0.87 1.4
394,833 + 2.0
394,969 - -0.4
394,970 - -0.7
394,976 - -0.4
395,114 + -0.8
395,162 + -0.6
395,406 - 16458 mRNA_8090 0.14 -0.1
395,566 - 16458 mRNA_8090 0.21 1.2
395,834 + 16458 mRNA_8090 0.33 1.1
395,861 - 16458 mRNA_8090 0.34 -0.3