Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8069

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8068: 16436 - KOG1198 Zinc-binding oxidoreductase, at 347734 to 349027 16436 mRNA_8069: 16437 - K11240 MSG5 tyrosine-protein phosphatase MSG5, at 349266 to 352237 16437 mRNA_8070: 16438 - KOG2744 DNA-binding proteins Bright/BRCAA1/RBP1 and related proteins containing BRIGHT domain, at 352971 to 356378 16438

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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348,296 + 16436 mRNA_8068 0.43 0.1
348,393 - 16436 mRNA_8068 0.51 1.4
348,858 + 16436 mRNA_8068 0.87 -1.4
348,881 + 16436 mRNA_8068 0.89 0.7
349,280 - 1.1
349,617 + 16437 mRNA_8069 0.12 -0.0
349,738 - 16437 mRNA_8069 0.16 2.0
349,794 - 16437 mRNA_8069 0.18 0.0
349,851 - 16437 mRNA_8069 0.20 0.7
349,880 - 16437 mRNA_8069 0.21 1.0
350,063 - 16437 mRNA_8069 0.27 0.9
350,216 + 16437 mRNA_8069 0.32 -0.3
350,505 + 16437 mRNA_8069 0.42 0.4
351,071 - 16437 mRNA_8069 0.61 -1.3
351,372 - 16437 mRNA_8069 0.71 1.7
351,519 - 16437 mRNA_8069 0.76 0.1
351,551 - 16437 mRNA_8069 0.77 0.4
351,798 - 16437 mRNA_8069 0.85 0.8
351,799 - 16437 mRNA_8069 0.85 0.6
351,807 + 16437 mRNA_8069 0.85 0.1
351,965 - -0.9
351,975 + 1.2
352,103 - 0.9
352,112 + 1.0
352,381 - -0.2
352,381 - -1.0
352,413 - 0.4
352,415 - 0.0
352,422 - 0.4
352,547 - 1.4
352,692 - 0.9
352,692 - -2.2
352,693 - 0.8
352,700 + -1.1
352,709 - -1.8
352,714 + 2.2
352,855 - 1.3
352,884 - -0.2
352,999 - -0.8