Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8005

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8004: 16372 - K06648 SWI6 regulatory protein SWI6, at 191300 to 193753 16372 mRNA_8005: 16373 - BLAST alpha- -mannosyltransferase alg11p [Moniliophthor..., at 194577 to 195838 16373

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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193,620 - -0.4
193,818 - -1.8
193,929 - -0.7
193,996 + 2.9
194,080 - 0.7
194,161 + 1.4
194,366 + -0.1
194,476 + 0.6
194,505 + -0.1
194,506 + 0.3
194,631 + -1.6
194,644 - 0.5
194,804 + 16373 mRNA_8005 0.18 1.5
194,809 - 16373 mRNA_8005 0.18 1.2
194,816 + 16373 mRNA_8005 0.19 -1.2
194,959 - 16373 mRNA_8005 0.30 -0.3
195,238 - 16373 mRNA_8005 0.52 1.1
195,699 + 16373 mRNA_8005 0.89 1.7
195,709 + 16373 mRNA_8005 0.90 -0.0
195,710 + 16373 mRNA_8005 0.90 2.2
195,722 + -0.8
195,878 + -0.6
196,004 + -1.1
196,024 + 0.2
196,182 + 0.2
196,262 - -0.7
196,306 - 0.3
196,747 - -0.5
196,755 - 1.1