Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7999

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7998: 16366 - KOG3156 Uncharacterized membrane protein, at 176627 to 177709 16366 mRNA_7999: 16367 - K10994 RAD9A cell cycle checkpoint control protein RAD9A, at 177844 to 179868 16367 mRNA_8000: 16368 - K08991 MUS81 crossover junction endonuclease MUS81, at 180086 to 183760 16368

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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176,903 + 16366 mRNA_7998 0.25 0.9
177,761 - 1.6
177,769 - 0.0
177,779 + 0.2
177,902 + -2.6
177,923 + -0.1
177,925 + 1.1
178,211 + 16367 mRNA_7999 0.18 1.8
178,929 + 16367 mRNA_7999 0.54 1.5
179,762 - 0.0
179,880 - -0.2
180,114 - -0.6
180,169 - -0.7
180,226 + 0.2
180,384 - -0.2
180,549 + 16368 mRNA_8000 0.13 1.6
180,724 + 16368 mRNA_8000 0.17 -0.1
180,757 + 16368 mRNA_8000 0.18 0.4
180,858 - 16368 mRNA_8000 0.21 0.1