Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7990

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7989: 16357 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 157953 to 158694 16357 mRNA_7990: 16358 - Hypothetical Protein, at 159249 to 159873 16358

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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158,281 + 16357 mRNA_7989 0.44 2.4
158,327 + 16357 mRNA_7989 0.50 -0.7
158,566 + 16357 mRNA_7989 0.83 -0.3
158,628 + 0.2
158,762 + -0.9
158,783 + -0.3
158,864 - -0.0
158,923 + 0.7
158,925 + 0.9
159,209 - 0.7
159,246 - 0.1
159,352 - 16358 mRNA_7990 0.16 -0.2
159,364 + 16358 mRNA_7990 0.18 1.9
159,484 + 16358 mRNA_7990 0.38 1.8
159,922 + 0.4
160,312 - -0.5
160,349 + 2.4
160,362 + 1.2
160,620 + 0.2
160,654 - -0.1
160,655 + 0.9
160,666 + 0.6
160,748 - -2.0
160,812 + -0.6
160,816 + -3.8
160,823 + 1.0
160,824 + 2.3
160,834 - -1.2
160,834 - -1.3
160,836 + 0.8
160,838 - 0.4
160,843 + 0.1
160,852 - 0.5
160,858 + 0.9
160,858 + 0.7