Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7989

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7988: 16356 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 156478 to 157308 16356 mRNA_7989: 16357 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 157953 to 158694 16357 mRNA_7990: 16358 - Hypothetical Protein, at 159249 to 159873 16358

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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157,027 + 16356 mRNA_7988 0.66 0.4
157,027 + 16356 mRNA_7988 0.66 -0.3
157,302 + 1.3
157,413 - -0.9
157,439 + -1.6
157,441 - 0.5
157,863 + -0.3
158,048 + 16357 mRNA_7989 0.13 -1.0
158,202 - 16357 mRNA_7989 0.34 0.8
158,204 + 16357 mRNA_7989 0.34 -0.7
158,281 + 16357 mRNA_7989 0.44 2.4
158,327 + 16357 mRNA_7989 0.50 -0.7
158,566 + 16357 mRNA_7989 0.83 -0.3
158,628 + 0.2
158,762 + -0.9
158,783 + -0.3
158,864 - -0.0
158,923 + 0.7
158,925 + 0.9
159,209 - 0.7
159,246 - 0.1
159,352 - 16358 mRNA_7990 0.16 -0.2
159,364 + 16358 mRNA_7990 0.18 1.9
159,484 + 16358 mRNA_7990 0.38 1.8