Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7984

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7983: 16351 - K11495 CENPA histone H3-like centromeric protein A, at 146658 to 147555 16351 mRNA_7984: 16352 - KOG3030 Lipid phosphate phosphatase and related enzymes of the PAP2 family, at 147825 to 148945 16352 mRNA_7985: 16353 - K15440 TAD1, ADAT1 tRNA-specific adenosine deaminase 1, at 149093 to 150954 16353

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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147,774 + 1.0
147,849 + 0.8
148,161 - 16352 mRNA_7984 0.30 -1.3
148,166 + 16352 mRNA_7984 0.30 -0.8
148,446 - 16352 mRNA_7984 0.55 0.4
148,454 + 16352 mRNA_7984 0.56 1.8
148,459 + 16352 mRNA_7984 0.57 2.2
148,763 - 16352 mRNA_7984 0.84 4.5
148,902 - 2.0
148,919 + 1.2
149,043 - 2.7
149,044 - 0.7
149,046 + 2.8
149,046 - 0.1
149,064 + 1.2
149,090 + 0.3
149,335 + 16353 mRNA_7985 0.13 0.2
149,401 + 16353 mRNA_7985 0.17 2.6
149,522 + 16353 mRNA_7985 0.23 -0.0
149,527 - 16353 mRNA_7985 0.23 -0.2
149,660 - 16353 mRNA_7985 0.30 0.9
149,674 + 16353 mRNA_7985 0.31 0.2