Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7981

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7980: 16348 - KOG0550 Molecular chaperone (DnaJ superfamily), at 138998 to 141142 16348 mRNA_7981: 16349 - KOG2504 Monocarboxylate transporter, at 141526 to 143466 16349 mRNA_7982: 16350 - KOG2504 Monocarboxylate transporter, at 144302 to 146236 16350

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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140,592 - 16348 mRNA_7980 0.74 0.7
141,086 + 2.8
141,097 + 2.7
141,338 + 3.2
141,415 + -0.5
141,462 + 0.4
141,470 + 0.7
141,616 + 0.2
141,792 - 16349 mRNA_7981 0.14 1.6
141,919 - 16349 mRNA_7981 0.20 1.1
142,180 + 16349 mRNA_7981 0.34 2.0
142,334 - 16349 mRNA_7981 0.42 -1.1
142,666 + 16349 mRNA_7981 0.59 0.7
142,903 + 16349 mRNA_7981 0.71 -0.2
142,933 + 16349 mRNA_7981 0.72 0.3
143,218 + 16349 mRNA_7981 0.87 -0.6
143,367 - -1.1
143,444 + 1.1
143,490 - -0.5
143,562 - 0.3
143,921 - 0.4
143,921 - 1.1
144,154 + -0.3
144,306 + -0.2