Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7980

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7979: 16347 - KOG0504 FOG Ankyrin repeat, at 137884 to 138763 16347 mRNA_7980: 16348 - KOG0550 Molecular chaperone (DnaJ superfamily), at 138998 to 141142 16348 mRNA_7981: 16349 - KOG2504 Monocarboxylate transporter, at 141526 to 143466 16349

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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138,045 + 16347 mRNA_7979 0.18 0.9
138,870 + 3.9
138,979 - 3.3
139,086 - 0.5
139,127 - -0.1
139,266 - 16348 mRNA_7980 0.12 1.6
139,905 - 16348 mRNA_7980 0.42 1.7
139,964 - 16348 mRNA_7980 0.45 -0.1
140,239 - 16348 mRNA_7980 0.58 -0.2
140,241 + 16348 mRNA_7980 0.58 -0.0
140,257 - 16348 mRNA_7980 0.59 -0.4
140,286 - 16348 mRNA_7980 0.60 1.9
140,292 + 16348 mRNA_7980 0.60 0.1
140,371 - 16348 mRNA_7980 0.64 -0.2
140,592 - 16348 mRNA_7980 0.74 0.7
141,086 + 2.8
141,097 + 2.7
141,338 + 3.2
141,415 + -0.5
141,462 + 0.4
141,470 + 0.7
141,616 + 0.2
141,792 - 16349 mRNA_7981 0.14 1.6
141,919 - 16349 mRNA_7981 0.20 1.1