Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7975

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7974: 16342 - Hypothetical Protein, at 128673 to 129137 16342 mRNA_7975: 16343 - KOG0762 Mitochondrial carrier protein, at 129725 to 131537 16343 mRNA_7976: 16344 - BLAST carbohydrate-binding module family 13 protein [Schizo..., at 131943 to 133643 16344

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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128,872 - 16342 mRNA_7974 0.43 1.3
128,877 + 16342 mRNA_7974 0.44 -0.1
128,897 - 16342 mRNA_7974 0.48 2.9
129,203 + -0.1
129,230 - 0.8
129,307 - 0.9
129,309 + -0.5
129,309 + -0.1
129,312 - -0.4
129,320 - -0.6
129,338 + 0.3
129,462 - -1.2
129,590 + 1.4
129,638 + 1.0
129,730 - 0.6
129,882 - 0.1
129,895 + 1.0
130,032 - 16343 mRNA_7975 0.17 0.9
130,050 - 16343 mRNA_7975 0.18 0.7
130,336 + 16343 mRNA_7975 0.34 1.1
130,859 + 16343 mRNA_7975 0.63 -2.1
130,966 + 16343 mRNA_7975 0.68 0.4
131,060 + 16343 mRNA_7975 0.74 0.5
131,181 - 16343 mRNA_7975 0.80 -1.0
131,224 + 16343 mRNA_7975 0.83 -0.2
131,357 - 1.4
131,482 + 1.2
131,482 + 1.8
131,512 + -1.2
131,653 - -1.4
131,958 - 0.4
131,975 + -0.5
132,014 + 1.8
132,117 - 16344 mRNA_7976 0.10 -0.0
132,243 - 16344 mRNA_7976 0.18 0.1
132,437 - 16344 mRNA_7976 0.29 0.5
132,531 + 16344 mRNA_7976 0.35 0.8