Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7969

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7968: 16336 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 112971 to 114201 16336 mRNA_7969: 16337 - Hypothetical Protein, at 114657 to 115244 16337 mRNA_7970: 16338 - SUPERFAMILY--SSF144232, at 115514 to 116661 16338

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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113,690 - 16336 mRNA_7968 0.58 0.1
113,792 - 16336 mRNA_7968 0.67 2.1
113,860 - 16336 mRNA_7968 0.72 -1.4
113,919 + 16336 mRNA_7968 0.77 1.5
113,979 + 16336 mRNA_7968 0.82 -1.1
113,981 - 16336 mRNA_7968 0.82 0.7
113,983 + 16336 mRNA_7968 0.82 -1.4
113,983 - 16336 mRNA_7968 0.82 1.7
113,998 + 16336 mRNA_7968 0.83 1.2
114,069 - 16336 mRNA_7968 0.89 3.2
114,162 - 0.0
114,185 - -0.5
114,185 - -0.0
114,188 - 2.9
114,257 + 0.5
114,260 + 1.0
114,323 - -1.3
114,377 + 0.6
114,384 - 2.6
114,530 + 2.2
114,531 + 0.9
114,647 + -0.5
114,651 - -0.6
114,724 - 16337 mRNA_7969 0.11 0.1
114,731 + 16337 mRNA_7969 0.13 1.7
114,760 - 16337 mRNA_7969 0.18 0.6
114,840 - 16337 mRNA_7969 0.31 -1.3
114,980 - 16337 mRNA_7969 0.55 0.8
114,998 - 16337 mRNA_7969 0.58 -0.9
115,000 - 16337 mRNA_7969 0.58 1.2
115,078 - 16337 mRNA_7969 0.72 0.1
115,087 - 16337 mRNA_7969 0.73 0.6
115,087 + 16337 mRNA_7969 0.73 1.3
115,090 - 16337 mRNA_7969 0.74 1.8
115,093 - 16337 mRNA_7969 0.74 0.0
115,182 + 16337 mRNA_7969 0.89 -0.2
115,234 + -0.7
115,284 - 0.5
115,306 + 0.8
115,309 - 0.2
115,534 + -0.8
115,698 + 16338 mRNA_7970 0.16 -0.2
115,717 - 16338 mRNA_7970 0.18 1.2
115,819 - 16338 mRNA_7970 0.27 2.1
115,839 + 16338 mRNA_7970 0.28 1.2
115,966 - 16338 mRNA_7970 0.39 0.5
116,048 + 16338 mRNA_7970 0.47 1.0
116,051 - 16338 mRNA_7970 0.47 0.1
116,114 + 16338 mRNA_7970 0.52 1.5
116,117 + 16338 mRNA_7970 0.53 -0.5
116,135 - 16338 mRNA_7970 0.54 1.3
116,170 + 16338 mRNA_7970 0.57 -0.2
116,185 - 16338 mRNA_7970 0.58 2.1