Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7968

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7967: 16335 - Hypothetical Protein, at 112365 to 112943 16335 mRNA_7968: 16336 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 112971 to 114201 16336 mRNA_7969: 16337 - Hypothetical Protein, at 114657 to 115244 16337

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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112,224 + 0.7
112,225 + 0.8
112,239 - -0.2
112,275 + 0.6
112,360 - -0.6
112,520 + 16335 mRNA_7967 0.27 0.6
112,520 - 16335 mRNA_7967 0.27 -1.2
112,539 + 16335 mRNA_7967 0.30 0.2
112,539 + 16335 mRNA_7967 0.30 2.0
112,662 + 16335 mRNA_7967 0.51 2.5
112,677 - 16335 mRNA_7967 0.54 0.2
112,678 + 16335 mRNA_7967 0.54 2.5
112,816 - 16335 mRNA_7967 0.78 -0.2
112,820 - 16335 mRNA_7967 0.79 -0.5
112,999 + 0.7
113,203 + 16336 mRNA_7968 0.19 0.6
113,231 + 16336 mRNA_7968 0.21 -1.6
113,255 - 16336 mRNA_7968 0.23 -0.6
113,255 - 16336 mRNA_7968 0.23 1.4
113,257 - 16336 mRNA_7968 0.23 1.1
113,286 + 16336 mRNA_7968 0.26 -0.7
113,286 + 16336 mRNA_7968 0.26 -0.4
113,286 + 16336 mRNA_7968 0.26 2.9
113,429 + 16336 mRNA_7968 0.37 0.6
113,442 - 16336 mRNA_7968 0.38 -0.9
113,502 - 16336 mRNA_7968 0.43 2.2
113,508 - 16336 mRNA_7968 0.44 -0.8
113,532 + 16336 mRNA_7968 0.46 1.5
113,564 - 16336 mRNA_7968 0.48 1.2
113,567 + 16336 mRNA_7968 0.48 -0.5
113,568 - 16336 mRNA_7968 0.48 1.6
113,576 + 16336 mRNA_7968 0.49 0.6
113,590 - 16336 mRNA_7968 0.50 3.0
113,649 + 16336 mRNA_7968 0.55 -0.0
113,690 - 16336 mRNA_7968 0.58 0.1
113,792 - 16336 mRNA_7968 0.67 2.1
113,860 - 16336 mRNA_7968 0.72 -1.4
113,919 + 16336 mRNA_7968 0.77 1.5
113,979 + 16336 mRNA_7968 0.82 -1.1
113,981 - 16336 mRNA_7968 0.82 0.7
113,983 + 16336 mRNA_7968 0.82 -1.4
113,983 - 16336 mRNA_7968 0.82 1.7
113,998 + 16336 mRNA_7968 0.83 1.2
114,069 - 16336 mRNA_7968 0.89 3.2
114,162 - 0.0
114,185 - -0.5
114,185 - -0.0
114,188 - 2.9
114,257 + 0.5
114,260 + 1.0
114,323 - -1.3
114,377 + 0.6
114,384 - 2.6
114,530 + 2.2
114,531 + 0.9
114,647 + -0.5
114,651 - -0.6
114,724 - 16337 mRNA_7969 0.11 0.1
114,731 + 16337 mRNA_7969 0.13 1.7
114,760 - 16337 mRNA_7969 0.18 0.6
114,840 - 16337 mRNA_7969 0.31 -1.3
114,980 - 16337 mRNA_7969 0.55 0.8
114,998 - 16337 mRNA_7969 0.58 -0.9
115,000 - 16337 mRNA_7969 0.58 1.2
115,078 - 16337 mRNA_7969 0.72 0.1
115,087 - 16337 mRNA_7969 0.73 0.6
115,087 + 16337 mRNA_7969 0.73 1.3
115,090 - 16337 mRNA_7969 0.74 1.8
115,093 - 16337 mRNA_7969 0.74 0.0
115,182 + 16337 mRNA_7969 0.89 -0.2