Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7966

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7965: 16333 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 109378 to 110240 16333 mRNA_7966: 16334 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 110681 to 111565 16334 mRNA_7967: 16335 - Hypothetical Protein, at 112365 to 112943 16335

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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109,752 + 16333 mRNA_7965 0.43 1.6
109,758 - 16333 mRNA_7965 0.44 -0.7
109,771 + 16333 mRNA_7965 0.46 2.6
109,913 + 16333 mRNA_7965 0.62 -0.0
109,920 + 16333 mRNA_7965 0.63 1.4
109,950 - 16333 mRNA_7965 0.66 -1.1
109,981 + 16333 mRNA_7965 0.70 -1.7
110,008 + 16333 mRNA_7965 0.73 1.3
110,069 - 16333 mRNA_7965 0.80 -0.7
110,229 - 0.2
110,330 + 0.5
110,388 + -0.7
110,630 - -1.3
110,738 + 0.4
110,743 - 0.4
110,821 - 16334 mRNA_7966 0.16 -0.0
110,923 + 16334 mRNA_7966 0.27 0.2
110,928 + 16334 mRNA_7966 0.28 1.1
111,129 + 16334 mRNA_7966 0.51 -0.1
111,237 - 16334 mRNA_7966 0.63 -0.0
111,239 - 16334 mRNA_7966 0.63 0.9
111,279 - 16334 mRNA_7966 0.68 -0.2
111,337 - 16334 mRNA_7966 0.74 1.2
111,354 + 16334 mRNA_7966 0.76 1.7
111,354 + 16334 mRNA_7966 0.76 0.8
111,354 + 16334 mRNA_7966 0.76 0.1
111,355 + 16334 mRNA_7966 0.76 2.1
111,360 - 16334 mRNA_7966 0.77 0.1
111,473 + 16334 mRNA_7966 0.89 -0.4
111,605 + -0.9
111,662 + 0.5
111,667 - 1.1
111,682 + 0.2
111,682 - -0.8
111,728 + 0.0
111,753 + -0.3
111,755 + -1.6
111,761 - 2.2
111,764 + 0.3
111,767 - 1.0
111,772 - 2.3
111,780 + 0.9
111,793 - -1.2
111,935 + -0.3
112,224 + 0.7
112,225 + 0.8
112,239 - -0.2
112,275 + 0.6
112,360 - -0.6
112,520 + 16335 mRNA_7967 0.27 0.6
112,520 - 16335 mRNA_7967 0.27 -1.2
112,539 + 16335 mRNA_7967 0.30 0.2
112,539 + 16335 mRNA_7967 0.30 2.0