Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7965

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7964: 16332 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 108075 to 108950 16332 mRNA_7965: 16333 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 109378 to 110240 16333 mRNA_7966: 16334 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 110681 to 111565 16334

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
108,552 + 16332 mRNA_7964 0.54 0.7
108,585 - 16332 mRNA_7964 0.58 -0.1
108,623 + 16332 mRNA_7964 0.63 -1.6
108,713 + 16332 mRNA_7964 0.73 0.9
108,748 - 16332 mRNA_7964 0.77 1.3
108,863 + 0.0
108,868 - 0.1
108,917 - 0.1
108,933 + 1.4
108,988 + 0.8
108,988 + 0.1
109,049 + 0.2
109,158 + 0.4
109,451 + -0.2
109,515 - 16333 mRNA_7965 0.16 -1.6
109,619 - 16333 mRNA_7965 0.28 0.2
109,670 + 16333 mRNA_7965 0.34 -0.3
109,752 + 16333 mRNA_7965 0.43 1.6
109,758 - 16333 mRNA_7965 0.44 -0.7
109,771 + 16333 mRNA_7965 0.46 2.6
109,913 + 16333 mRNA_7965 0.62 -0.0
109,920 + 16333 mRNA_7965 0.63 1.4
109,950 - 16333 mRNA_7965 0.66 -1.1
109,981 + 16333 mRNA_7965 0.70 -1.7
110,008 + 16333 mRNA_7965 0.73 1.3
110,069 - 16333 mRNA_7965 0.80 -0.7
110,229 - 0.2
110,330 + 0.5
110,388 + -0.7
110,630 - -1.3
110,738 + 0.4
110,743 - 0.4
110,821 - 16334 mRNA_7966 0.16 -0.0
110,923 + 16334 mRNA_7966 0.27 0.2
110,928 + 16334 mRNA_7966 0.28 1.1
111,129 + 16334 mRNA_7966 0.51 -0.1
111,237 - 16334 mRNA_7966 0.63 -0.0
111,239 - 16334 mRNA_7966 0.63 0.9