Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7964

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7963: 16331 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 106769 to 107651 16331 mRNA_7964: 16332 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 108075 to 108950 16332 mRNA_7965: 16333 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 109378 to 110240 16333

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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107,263 + 16331 mRNA_7963 0.56 1.4
107,420 + 16331 mRNA_7963 0.74 2.3
107,430 + 16331 mRNA_7963 0.75 0.6
107,451 - 16331 mRNA_7963 0.77 1.4
107,467 + 16331 mRNA_7963 0.79 2.0
107,604 + -1.0
107,618 - 0.3
107,635 + 0.2
107,886 + 3.0
107,910 - -0.3
107,916 + 0.5
108,012 - 0.7
108,015 - -0.6
108,019 - 0.5
108,178 + 16332 mRNA_7964 0.12 0.0
108,345 - 16332 mRNA_7964 0.31 -0.3
108,370 + 16332 mRNA_7964 0.34 0.2
108,552 + 16332 mRNA_7964 0.54 0.7
108,585 - 16332 mRNA_7964 0.58 -0.1
108,623 + 16332 mRNA_7964 0.63 -1.6
108,713 + 16332 mRNA_7964 0.73 0.9
108,748 - 16332 mRNA_7964 0.77 1.3
108,863 + 0.0
108,868 - 0.1
108,917 - 0.1
108,933 + 1.4
108,988 + 0.8
108,988 + 0.1
109,049 + 0.2
109,158 + 0.4
109,451 + -0.2
109,515 - 16333 mRNA_7965 0.16 -1.6
109,619 - 16333 mRNA_7965 0.28 0.2
109,670 + 16333 mRNA_7965 0.34 -0.3
109,752 + 16333 mRNA_7965 0.43 1.6
109,758 - 16333 mRNA_7965 0.44 -0.7
109,771 + 16333 mRNA_7965 0.46 2.6
109,913 + 16333 mRNA_7965 0.62 -0.0
109,920 + 16333 mRNA_7965 0.63 1.4
109,950 - 16333 mRNA_7965 0.66 -1.1