Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7948

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7947: 16315 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 73248 to 74114 16315 mRNA_7948: 16316 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 74444 to 75195 16316 mRNA_7949: 16317 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 75609 to 76482 16317

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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73,529 - 16315 mRNA_7947 0.32 1.6
73,530 + 16315 mRNA_7947 0.33 -0.8
73,537 + 16315 mRNA_7947 0.33 0.1
73,779 - 16315 mRNA_7947 0.61 0.4
73,805 + 16315 mRNA_7947 0.64 -0.3
74,097 - 0.4
74,108 + 0.1
74,119 + 1.0
74,345 - 0.8
74,350 + 2.0
74,359 - -1.0
74,363 - 0.6
74,366 + -0.1
74,380 + 1.1
74,500 - 1.2
74,504 + -1.1
74,570 - 16316 mRNA_7948 0.17 1.5
74,594 - 16316 mRNA_7948 0.20 -1.5
74,934 + 16316 mRNA_7948 0.65 -0.1
75,131 - 1.4
75,532 + 0.6
75,573 - 0.5
75,573 - 1.9
75,581 - -0.7
75,591 + -0.7
75,595 + 1.3
75,601 - 0.6
75,601 - -0.0
75,836 + 16317 mRNA_7949 0.26 0.1
75,850 - 16317 mRNA_7949 0.28 0.3
75,866 + 16317 mRNA_7949 0.29 0.1
75,959 - 16317 mRNA_7949 0.40 -0.4
76,096 - 16317 mRNA_7949 0.56 0.2
76,104 + 16317 mRNA_7949 0.57 -0.2
76,182 + 16317 mRNA_7949 0.66 1.0