Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7940

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7939: 16307 - Hypothetical Protein, at 58388 to 59651 16307 mRNA_7940: 16308 - Hypothetical Protein, at 60107 to 61381 16308 mRNA_7941: 16309 - Hypothetical Protein, at 61623 to 61945 16309 mRNA_7942: 16310 - K12824 TCERG1, CA150 transcription elongation regulator 1, at 62103 to 65141 16310

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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59,191 + 16307 mRNA_7939 0.64 0.1
59,406 + 16307 mRNA_7939 0.81 -0.2
59,460 - 16307 mRNA_7939 0.85 1.0
59,467 + 16307 mRNA_7939 0.85 1.7
59,929 + 3.4
59,960 + 0.8
60,005 - -1.7
60,028 - -0.1
60,241 - 16308 mRNA_7940 0.11 0.2
60,586 - 16308 mRNA_7940 0.38 -0.8
60,746 - 16308 mRNA_7940 0.50 0.6
60,849 + 16308 mRNA_7940 0.58 0.6
60,865 + 16308 mRNA_7940 0.59 -0.6
61,125 + 16308 mRNA_7940 0.80 0.2
61,208 + 16308 mRNA_7940 0.86 0.1
61,311 - -1.7
61,317 + -1.3
61,512 + -0.2
61,796 + 16309 mRNA_7941 0.54 0.7
61,806 - 16309 mRNA_7941 0.57 1.7
61,807 + 16309 mRNA_7941 0.57 0.9
61,924 + 0.4
62,085 - 1.9