Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7939

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7938: 16306 - Hypothetical Protein, at 55876 to 58183 16306 mRNA_7939: 16307 - Hypothetical Protein, at 58388 to 59651 16307 mRNA_7940: 16308 - Hypothetical Protein, at 60107 to 61381 16308

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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57,544 + 16306 mRNA_7938 0.72 0.0
57,555 + 16306 mRNA_7938 0.73 -0.7
57,579 - 16306 mRNA_7938 0.74 -1.4
57,638 + 16306 mRNA_7938 0.76 -0.3
57,641 - 16306 mRNA_7938 0.76 0.2
57,944 + 16306 mRNA_7938 0.90 0.3
58,102 - 0.1
58,157 - 2.3
58,288 - -0.1
58,302 + 0.8
58,321 - 0.3
58,341 + 0.2
58,503 + 1.5
58,576 + 16307 mRNA_7939 0.15 2.6
59,191 + 16307 mRNA_7939 0.64 0.1
59,406 + 16307 mRNA_7939 0.81 -0.2
59,460 - 16307 mRNA_7939 0.85 1.0
59,467 + 16307 mRNA_7939 0.85 1.7
59,929 + 3.4
59,960 + 0.8
60,005 - -1.7
60,028 - -0.1
60,241 - 16308 mRNA_7940 0.11 0.2
60,586 - 16308 mRNA_7940 0.38 -0.8