Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7931

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7931: 16299 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 46031 to 46898 16299 mRNA_7932: 16300 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 47221 to 48247 16300

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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45,144 + 1.8
45,189 - -0.4
45,212 + -0.2
45,379 + -0.5
45,389 - 0.3
45,477 + 0.1
45,479 + 2.1
45,638 + -1.1
45,647 - 1.1
45,648 + 1.6
45,655 - -0.5
45,683 + 2.0
46,089 - -1.0
46,118 - 16299 mRNA_7931 0.10 2.1
46,192 + 16299 mRNA_7931 0.19 -0.7
46,451 + 16299 mRNA_7931 0.48 0.4
46,809 + 16299 mRNA_7931 0.90 -1.2
46,835 + -1.2
46,835 + 1.2
46,852 + 2.1
47,001 - 0.1
47,096 + -0.3
47,105 + -0.6
47,117 - -1.2
47,230 + 0.5
47,233 - 1.7
47,278 + 0.9
47,354 - 16300 mRNA_7932 0.13 0.6
47,372 + 16300 mRNA_7932 0.15 0.8
47,502 - 16300 mRNA_7932 0.27 0.7
47,673 + 16300 mRNA_7932 0.44 1.7
47,855 + 16300 mRNA_7932 0.62 -2.2