Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7927

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7926: 16294 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 36892 to 37805 16294 mRNA_7927: 16295 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 38258 to 39116 16295 mRNA_7928: 16296 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 39408 to 40571 16296

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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37,269 + 16294 mRNA_7926 0.41 1.6
37,693 + 16294 mRNA_7926 0.88 -0.5
37,709 + 16294 mRNA_7926 0.89 0.7
37,843 - -1.6
37,990 + 0.5
37,993 - -2.5
37,993 - 1.7
37,993 - -0.9
37,996 + 0.1
37,998 - 2.5
38,009 + -0.3
38,094 + 2.0
38,140 + 1.2
38,146 - -0.3
38,168 + 0.6
38,173 + 0.4
38,175 - 1.2
38,205 + -1.3
38,274 + -0.4
38,288 + 0.1
38,309 + 1.4
38,556 + 16295 mRNA_7927 0.35 0.9
38,665 + 16295 mRNA_7927 0.47 -0.4
38,726 - 16295 mRNA_7927 0.54 0.0
38,735 - 16295 mRNA_7927 0.56 -0.1
38,741 + 16295 mRNA_7927 0.56 0.2
38,743 + 16295 mRNA_7927 0.56 0.5
38,820 + 16295 mRNA_7927 0.65 -0.6
38,822 - 16295 mRNA_7927 0.66 1.8
38,840 + 16295 mRNA_7927 0.68 0.4
38,842 + 16295 mRNA_7927 0.68 1.5
38,991 + 16295 mRNA_7927 0.85 -0.3
39,009 - 16295 mRNA_7927 0.87 0.5
39,022 + 16295 mRNA_7927 0.89 -0.3
39,057 + 0.4
39,131 + 1.4
39,165 + -1.5
39,177 - -0.7
39,264 - 0.2
39,302 - -0.5
39,317 + 1.1
39,338 + 0.0
39,479 - -0.1
39,639 - 16296 mRNA_7928 0.20 1.1
39,643 - 16296 mRNA_7928 0.20 2.2
39,665 + 16296 mRNA_7928 0.22 1.6
39,721 - 16296 mRNA_7928 0.27 -0.2
39,732 - 16296 mRNA_7928 0.28 1.8
39,791 + 16296 mRNA_7928 0.33 0.0
39,807 - 16296 mRNA_7928 0.34 0.5
39,890 + 16296 mRNA_7928 0.41 0.9
39,893 - 16296 mRNA_7928 0.42 -1.6
39,893 - 16296 mRNA_7928 0.42 0.2
39,893 - 16296 mRNA_7928 0.42 2.2
39,957 + 16296 mRNA_7928 0.47 2.1
39,992 - 16296 mRNA_7928 0.50 0.9
40,077 + 16296 mRNA_7928 0.57 0.0