Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7916

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7915: 16283 - SUPERFAMILY--SSF51445, at 12129 to 14300 16283 mRNA_7916: 16284 - K08683 HSD17B10 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxy-2-methylbutyryl-CoA dehydrogenase, at 14684 to 15975 16284 mRNA_7917: 16285 - K18477 RMT2 type IV protein arginine methyltransferase, at 16350 to 18077 16285

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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13,950 - 16283 mRNA_7915 0.84 0.4
13,953 + 16283 mRNA_7915 0.84 -1.6
14,353 - 1.3
14,370 - -0.0
14,410 + 0.5
14,532 - -0.3
14,689 + -2.5
14,696 - 1.2
14,836 - 16284 mRNA_7916 0.12 -2.2
14,843 + 16284 mRNA_7916 0.12 -0.3
15,322 - 16284 mRNA_7916 0.49 -0.6
15,555 + 16284 mRNA_7916 0.67 -1.4
15,576 + 16284 mRNA_7916 0.69 -0.5
15,823 - 16284 mRNA_7916 0.88 -0.4
15,852 + 0.7
16,151 - -0.0
16,153 - 0.7
16,182 + 2.5
16,184 - -0.1
16,282 - 0.3
16,291 - 0.5
16,291 - 1.2
16,303 + -1.4
16,307 - 2.9
16,309 + -0.7
16,310 - 0.2
16,314 + 0.5
16,317 + 1.0
16,325 - 1.6
16,344 - 0.2
16,360 - -0.4
16,446 - 1.0
16,663 - 16285 mRNA_7917 0.18 0.4