Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7915

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7915: 16283 - SUPERFAMILY--SSF51445, at 12129 to 14300 16283 mRNA_7916: 16284 - K08683 HSD17B10 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxy-2-methylbutyryl-CoA dehydrogenase, at 14684 to 15975 16284

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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11,145 + 0.3
11,292 - -0.7
11,303 - -0.7
11,307 - -0.2
11,309 - 1.7
11,310 + 0.1
11,314 + 0.4
11,323 + -0.8
11,342 - 0.7
11,431 + -0.1
11,437 - 1.1
11,461 - 1.4
11,465 - -0.6
11,475 + -0.4
11,482 - 0.9
11,482 - 2.0
11,483 + -0.0
11,484 + -0.7
11,486 - 2.0
11,486 - 0.4
11,486 - 0.4
11,487 - 1.3
11,489 - 0.2
11,494 + 0.4
11,494 - 0.2
11,495 + -0.4
11,497 + 0.2
11,500 - -0.3
11,501 - 1.8
11,503 - -0.5
11,503 - -1.6
11,503 - -0.4
11,505 - 1.6
11,506 + 0.8
11,506 + 0.2
11,506 + -0.2
11,512 + 0.7
11,513 - 2.0
11,513 - 4.0
11,524 - 1.7
11,525 - -1.2
11,527 + 0.8
11,527 - -0.0
11,529 - 0.2
11,529 - 0.4
11,530 - -1.2
11,530 + 0.1
11,532 + 1.7
11,540 + 1.6
11,547 + -1.0
11,549 + 0.8
11,557 + 1.1
11,557 + 0.2
11,557 + -0.6
11,561 - 0.1
11,573 - -0.2
11,586 - 1.4
11,589 + 0.4
11,591 + -1.7
11,596 + -1.4
11,609 + -0.4
11,620 + 2.6
11,646 - -0.8
11,649 - -1.5
11,651 - -0.0
11,654 + 1.3
11,656 - -0.8
11,671 - 0.5
11,674 + -0.2
11,676 + 1.3
11,680 + 1.1
11,684 + 1.2
11,684 - -0.5
11,696 - 1.9
11,696 + -1.8
11,704 - 1.3
11,709 - -1.4
11,709 - -0.4
11,710 + -1.0
11,710 + 1.9
11,715 - 0.6
11,721 + -0.1
11,724 - 1.9
11,724 - 0.1
11,734 - -0.8
11,755 - 0.5
11,766 + 0.5
11,767 + 0.6
11,768 - 0.4
11,778 - -0.2
11,779 + 0.5
11,792 - -0.8
11,904 + 0.4
11,915 + 1.8
11,922 + 0.8
11,923 - 0.0
11,931 + 2.0
11,938 - 3.0
12,072 + -0.1
12,180 + 1.6
12,330 - -0.6
12,410 - 16283 mRNA_7915 0.13 -1.2
12,645 - 16283 mRNA_7915 0.24 -2.3
12,767 - 16283 mRNA_7915 0.29 1.0
12,784 + 16283 mRNA_7915 0.30 2.7
13,198 - 16283 mRNA_7915 0.49 1.9
13,417 + 16283 mRNA_7915 0.59 -0.3
13,504 - 16283 mRNA_7915 0.63 1.4
13,509 + 16283 mRNA_7915 0.64 1.9
13,533 + 16283 mRNA_7915 0.65 0.9
13,950 - 16283 mRNA_7915 0.84 0.4
13,953 + 16283 mRNA_7915 0.84 -1.6
14,353 - 1.3
14,370 - -0.0
14,410 + 0.5
14,532 - -0.3
14,689 + -2.5
14,696 - 1.2
14,836 - 16284 mRNA_7916 0.12 -2.2
14,843 + 16284 mRNA_7916 0.12 -0.3