Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7898

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7897: 16265 - K10872 DMC1 meiotic recombination protein DMC1, at 1325676 to 1327786 16265 mRNA_7898: 16266 - K12660 rhmA 2-dehydro-3-deoxy-L-rhamnonate aldolase, at 1328005 to 1329095 16266 mRNA_7899: 16267 - K00618 E2.3.1.1 amino-acid N-acetyltransferase, at 1329365 to 1331583 16267

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,327,319 + 16265 mRNA_7897 0.78 0.4
1,327,803 - 0.6
1,327,889 - 0.1
1,328,051 + 1.5
1,328,224 - 16266 mRNA_7898 0.20 2.6
1,328,515 - 16266 mRNA_7898 0.47 0.1
1,328,961 - 16266 mRNA_7898 0.88 -1.1
1,329,098 - -1.1
1,329,201 + -1.7
1,329,216 - -0.1
1,329,278 + -0.5
1,329,310 - 0.5
1,329,591 - 16267 mRNA_7899 0.10 1.7
1,329,636 - 16267 mRNA_7899 0.12 0.8
1,329,834 + 16267 mRNA_7899 0.21 -2.6
1,329,980 + 16267 mRNA_7899 0.28 1.1
1,330,015 + 16267 mRNA_7899 0.29 -1.8