Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7897

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7896: 16264 - K01783 rpe, RPE ribulose-phosphate 3-epimerase, at 1324281 to 1325324 16264 mRNA_7897: 16265 - K10872 DMC1 meiotic recombination protein DMC1, at 1325676 to 1327786 16265 mRNA_7898: 16266 - K12660 rhmA 2-dehydro-3-deoxy-L-rhamnonate aldolase, at 1328005 to 1329095 16266

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,325,415 + -1.7
1,325,920 - 16265 mRNA_7897 0.12 -0.0
1,326,034 + 16265 mRNA_7897 0.17 -1.9
1,326,046 + 16265 mRNA_7897 0.18 0.8
1,326,379 - 16265 mRNA_7897 0.33 -0.6
1,326,762 + 16265 mRNA_7897 0.51 -0.3
1,326,768 - 16265 mRNA_7897 0.52 1.1
1,326,878 + 16265 mRNA_7897 0.57 0.7
1,327,319 + 16265 mRNA_7897 0.78 0.4
1,327,803 - 0.6
1,327,889 - 0.1
1,328,051 + 1.5
1,328,224 - 16266 mRNA_7898 0.20 2.6
1,328,515 - 16266 mRNA_7898 0.47 0.1