Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7855

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7854: 16222 - HMMPfam-Fungal protein of unknown function (DUF2015)-PF09435, at 1227887 to 1228457 16222 mRNA_7855: 16223 - K15443 TRM82, WDR4 tRNA (guanine-N(7)-)-methyltransferase subunit TRM82, at 1228855 to 1230795 16223 mRNA_7856: 16224 - K17783 ERV1, GFER, ALR mitochondrial FAD-linked sulfhydryl oxidase, at 1230890 to 1231576 16224

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
1,227,963 - 16222 mRNA_7854 0.13 -3.7
1,228,072 + 16222 mRNA_7854 0.32 1.1
1,228,171 + 16222 mRNA_7854 0.50 -0.3
1,228,354 + 16222 mRNA_7854 0.82 0.2
1,228,375 + 16222 mRNA_7854 0.85 -0.0
1,228,634 - 2.3
1,228,775 - -2.6
1,228,824 + -0.9
1,228,961 - -2.2
1,229,119 + 16223 mRNA_7855 0.14 -1.2
1,229,256 + 16223 mRNA_7855 0.21 0.0
1,229,397 - 16223 mRNA_7855 0.28 -1.3
1,230,435 - 16223 mRNA_7855 0.81 0.2
1,230,716 - 0.0
1,230,753 + -1.7
1,230,889 + -0.3
1,231,583 + 0.4
1,231,591 - 0.2
1,231,621 - -0.2
1,231,635 + 0.4
1,231,640 - 0.4
1,231,647 + 0.5
1,231,650 + -1.6
1,231,790 - -1.6