Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7823

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7823: 16191 - K03011 RPB3, POLR2C DNA-directed RNA polymerase II subunit RPB3, at 1150114 to 1151854 16191 mRNA_7824: 16192 - K17981 MTFP1, MTP18 mitochondrial fission process protein 1, at 1152339 to 1153268 16192

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,149,133 - -1.5
1,149,591 + -0.5
1,150,018 - 0.7
1,150,034 - -0.0
1,150,320 + 16191 mRNA_7823 0.12 -0.6
1,150,461 - 16191 mRNA_7823 0.20 -2.3
1,150,473 + 16191 mRNA_7823 0.21 -1.7
1,151,748 - 0.7
1,152,058 + -0.2
1,152,107 - 2.8
1,152,154 - 1.5
1,152,157 - -1.1
1,152,174 + -0.5
1,152,174 - 1.0
1,152,341 + -2.4
1,152,504 + 16192 mRNA_7824 0.18 2.0
1,152,615 - 16192 mRNA_7824 0.30 -0.4
1,152,744 - 16192 mRNA_7824 0.44 -0.7
1,152,780 - 16192 mRNA_7824 0.47 0.1