Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7811

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7810: 16178 - K02358 tuf, TUFM elongation factor Tu, at 1123749 to 1125478 16178 mRNA_7811: 16179 - Hypothetical Protein, at 1125900 to 1126824 16179 mRNA_7812: 16180 - K12876 RBM8A, Y14 RNA-binding protein 8A, at 1127228 to 1128549 16180

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,125,512 - -1.0
1,125,570 + -0.1
1,125,573 + -0.2
1,125,687 + 0.5
1,125,713 - 3.0
1,125,851 + -2.5
1,125,861 - -0.3
1,125,869 - -0.8
1,126,041 - 16179 mRNA_7811 0.15 -0.2
1,126,150 + 16179 mRNA_7811 0.27 1.2
1,126,453 - 16179 mRNA_7811 0.60 1.5
1,126,588 + 16179 mRNA_7811 0.74 1.9
1,126,744 - 0.6
1,126,842 - 1.6
1,126,897 - 0.6
1,127,162 - -0.1
1,127,276 - 0.7
1,127,303 - -0.1
1,127,312 - 0.1
1,127,337 + -2.0
1,127,342 - -0.8