Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7797

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7796: 16164 - K11322 EPC enhancer of polycomb-like protein, at 1086244 to 1089209 16164 mRNA_7797: 16165 - Hypothetical Protein, at 1089462 to 1090208 16165 mRNA_7798: 16166 - Hypothetical Protein, at 1090877 to 1091572 16166

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,089,482 + -0.0
1,089,606 + 16165 mRNA_7797 0.19 -0.1
1,089,612 + 16165 mRNA_7797 0.20 -1.8
1,089,614 + 16165 mRNA_7797 0.20 1.3
1,089,615 + 16165 mRNA_7797 0.20 1.4
1,089,758 - 16165 mRNA_7797 0.40 1.0
1,089,765 + 16165 mRNA_7797 0.41 1.7
1,089,768 - 16165 mRNA_7797 0.41 2.3
1,089,789 + 16165 mRNA_7797 0.44 0.7
1,089,790 + 16165 mRNA_7797 0.44 0.0
1,089,791 + 16165 mRNA_7797 0.44 -0.7
1,089,792 - 16165 mRNA_7797 0.44 -1.3
1,089,807 + 16165 mRNA_7797 0.46 -0.1
1,089,809 + 16165 mRNA_7797 0.46 -0.7
1,089,809 - 16165 mRNA_7797 0.46 2.4
1,089,809 + 16165 mRNA_7797 0.46 1.3
1,089,815 + 16165 mRNA_7797 0.47 0.6
1,089,816 + 16165 mRNA_7797 0.47 0.3
1,089,828 - 16165 mRNA_7797 0.49 -0.7
1,089,837 - 16165 mRNA_7797 0.50 -0.1
1,089,926 - 16165 mRNA_7797 0.62 -0.6
1,089,934 - 16165 mRNA_7797 0.63 -1.0
1,089,942 - 16165 mRNA_7797 0.64 -0.4
1,089,943 - 16165 mRNA_7797 0.64 1.3
1,089,949 - 16165 mRNA_7797 0.65 1.3
1,089,951 - 16165 mRNA_7797 0.65 -0.8
1,090,059 + 16165 mRNA_7797 0.80 1.8
1,090,098 + 16165 mRNA_7797 0.85 -0.3
1,090,108 + 16165 mRNA_7797 0.86 -0.7
1,090,114 - 16165 mRNA_7797 0.87 1.4
1,090,118 - 16165 mRNA_7797 0.88 -2.6
1,090,239 - 0.5
1,090,245 + 1.2
1,090,387 - 0.4
1,090,404 + 0.3
1,090,426 + -1.7
1,090,529 + -0.6
1,090,530 - 0.3
1,090,532 - -0.2
1,090,549 + -0.3
1,090,556 - 0.4
1,090,556 - 0.6
1,090,559 + 1.1
1,090,564 - 0.8
1,090,564 - 1.2
1,090,571 + 0.6
1,090,696 - 0.7
1,091,020 + 16166 mRNA_7798 0.21 0.2