Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7790

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7789: 16157 - Hypothetical Protein, at 1071827 to 1073399 16157 mRNA_7790: 16158 - Hypothetical Protein, at 1073885 to 1074580 16158 mRNA_7791: 16159 - HMMPfam-Integral peroxisomal membrane peroxin-PF06398, at 1075118 to 1077656 16159

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,073,046 - 16157 mRNA_7789 0.77 0.5
1,073,128 - 16157 mRNA_7789 0.83 -1.7
1,073,221 - 16157 mRNA_7789 0.89 -0.3
1,073,227 + 16157 mRNA_7789 0.89 0.1
1,073,530 + -0.6
1,073,572 - 1.3
1,073,688 - -0.2
1,073,714 - -1.0
1,074,025 - 16158 mRNA_7790 0.20 -1.3
1,074,125 + 16158 mRNA_7790 0.34 -0.5
1,074,415 - 16158 mRNA_7790 0.76 -1.0
1,074,718 + 3.3
1,074,728 - -0.5
1,074,866 - -1.1
1,074,875 - 0.3
1,074,886 + 1.4
1,074,887 + 1.4
1,074,892 + 2.3
1,074,893 - 0.8
1,075,020 - 0.3
1,075,024 - 0.4
1,075,027 + -0.3
1,075,033 + 1.6
1,075,034 + 1.7
1,075,040 - -1.5
1,075,057 - 0.6
1,075,210 + -0.7
1,075,336 - 0.9
1,075,506 - 16159 mRNA_7791 0.15 -0.5