Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7768

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7767: 16135 - ProSiteProfiles-LIS1 homology (LisH) motif profile.-PS50896, at 1018702 to 1022173 16135 mRNA_7768: 16136 - SUPERFAMILY--SSF52058, at 1022363 to 1024489 16136 mRNA_7769: 16137 - KOG2504 Monocarboxylate transporter, at 1024603 to 1026390 16137

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
1,021,372 - 16135 mRNA_7767 0.77 1.4
1,021,439 - 16135 mRNA_7767 0.79 0.6
1,021,449 + 16135 mRNA_7767 0.79 -0.2
1,021,668 + 16135 mRNA_7767 0.85 -0.4
1,021,750 - 16135 mRNA_7767 0.88 0.6
1,021,970 + -0.0
1,022,160 + -0.5
1,022,166 + -0.1
1,022,171 - 1.1
1,022,297 + 0.6
1,022,330 + -0.7
1,022,414 - 2.8
1,022,414 - -1.5
1,022,495 - 2.2
1,022,758 - 16136 mRNA_7768 0.19 -0.2
1,022,812 + 16136 mRNA_7768 0.21 1.3
1,023,054 - 16136 mRNA_7768 0.32 0.4
1,023,364 - 16136 mRNA_7768 0.47 1.3
1,023,373 + 16136 mRNA_7768 0.47 0.2
1,023,383 + 16136 mRNA_7768 0.48 -1.4
1,023,390 - 16136 mRNA_7768 0.48 1.1
1,023,511 - 16136 mRNA_7768 0.54 1.5
1,023,767 + 16136 mRNA_7768 0.66 0.9
1,023,919 - 16136 mRNA_7768 0.73 -2.0
1,023,948 + 16136 mRNA_7768 0.75 0.1
1,023,961 + 16136 mRNA_7768 0.75 -1.2
1,023,968 + 16136 mRNA_7768 0.75 0.9
1,023,976 + 16136 mRNA_7768 0.76 0.3
1,024,077 + 16136 mRNA_7768 0.81 -0.1
1,024,082 - 16136 mRNA_7768 0.81 0.7
1,024,102 - 16136 mRNA_7768 0.82 0.7
1,024,219 + 16136 mRNA_7768 0.87 -1.1
1,024,243 + 16136 mRNA_7768 0.88 0.6
1,024,297 + -0.3
1,024,362 - -0.6
1,024,363 - 1.2
1,024,534 - 2.0
1,024,551 - 0.6
1,024,675 + -0.9
1,024,693 - -0.1
1,024,749 + 1.1
1,024,972 + 16137 mRNA_7769 0.21 1.4