Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7758

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7757: 16125 - Hypothetical Protein, at 997192 to 998453 16125 mRNA_7758: 16126 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 999313 to 1000093 16126 mRNA_7759: 16127 - K11824 AP2A AP-2 complex subunit alpha, at 1000288 to 1003990 16127

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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998,722 - -2.2
998,796 + 1.9
998,797 + 1.6
998,817 - 2.3
999,114 - -0.1
999,260 + -0.1
999,269 - -0.5
999,534 + 16126 mRNA_7758 0.28 -0.6
999,694 - 16126 mRNA_7758 0.49 0.8
999,700 - 16126 mRNA_7758 0.50 0.6
999,792 - 16126 mRNA_7758 0.61 1.9
999,828 - 16126 mRNA_7758 0.66 -1.0
999,838 - 16126 mRNA_7758 0.67 1.3
1,000,174 + -2.6
1,000,430 + 1.1
1,000,568 + -1.2
1,000,899 + 16127 mRNA_7759 0.17 -2.7