Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7741

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7740: 16108 - HMMPfam-Kinetochore complex Sim4 subunit Fta1-PF13092, at 966858 to 968054 16108 mRNA_7741: 16109 - Hypothetical Protein, at 968367 to 969216 16109 mRNA_7742: 16110 - KOG3630 Nuclear pore complex, Nup214/CAN component, at 969456 to 971369 16110

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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967,639 - 16108 mRNA_7740 0.65 -1.8
967,850 + 16108 mRNA_7740 0.83 0.9
967,850 + 16108 mRNA_7740 0.83 -0.3
968,111 - 1.6
968,113 - -1.2
968,308 + 0.3
968,312 - 0.3
968,314 - -0.0
968,769 - 16109 mRNA_7741 0.47 0.5
968,904 + 16109 mRNA_7741 0.63 1.5
968,923 + 16109 mRNA_7741 0.65 1.7
969,150 + 0.1
969,167 - 0.6
969,168 + 0.8
969,293 - -3.0
969,335 - -0.2