Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7726

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7725: 16093 - Hypothetical Protein, at 933861 to 936370 16093 mRNA_7726: 16094 - KOG1231 Proteins containing the FAD binding domain, at 937355 to 939752 16094 mRNA_7727: 16095 - K13354 SLC25A17, PMP34 solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17, at 940127 to 941686 16095

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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936,665 - -1.4
936,669 + 0.4
936,675 - 0.4
936,718 + -0.6
936,718 - 1.9
936,791 + 0.8
936,793 - 0.9
936,795 - 0.1
936,833 - -0.3
936,834 + -0.5
936,948 - 1.7
936,966 - 2.5
936,978 - 1.1
936,987 - 0.7
937,082 + 0.5
937,108 - -0.4
937,111 - 0.4
937,122 - 2.3
937,153 - -0.3
937,257 - 0.8
937,274 - 0.6
937,291 + 1.1
937,312 - 0.1
937,418 - 2.1
937,423 - 2.0
937,536 - 0.4
938,501 + 16094 mRNA_7726 0.48 1.8
938,578 + 16094 mRNA_7726 0.51 1.4
938,589 + 16094 mRNA_7726 0.51 0.4
938,715 + 16094 mRNA_7726 0.57 -0.1
938,739 - 16094 mRNA_7726 0.58 0.6
939,014 + 16094 mRNA_7726 0.69 -0.0
939,135 + 16094 mRNA_7726 0.74 -0.0
939,734 - 0.4
939,884 - 0.2
939,891 - 1.5
939,909 - -2.2
939,909 + -1.4
939,937 + -0.5
939,959 - 0.0
940,191 - 1.8
940,220 + 1.3
940,266 + -1.1
940,268 - -0.7
940,510 - 16095 mRNA_7727 0.25 1.5
940,531 + 16095 mRNA_7727 0.26 -0.9
940,536 - 16095 mRNA_7727 0.26 1.9
940,544 + 16095 mRNA_7727 0.27 0.6