Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7725

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7724: 16092 - KOG2644 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes, at 932061 to 933452 16092 mRNA_7725: 16093 - Hypothetical Protein, at 933861 to 936370 16093 mRNA_7726: 16094 - KOG1231 Proteins containing the FAD binding domain, at 937355 to 939752 16094

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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933,038 - 16092 mRNA_7724 0.70 -0.4
933,068 - 16092 mRNA_7724 0.72 2.5
933,307 - 16092 mRNA_7724 0.90 -1.2
933,356 - 0.1
933,363 + -0.1
933,369 + 0.2
933,375 + -0.3
933,489 - -0.4
933,505 - 0.7
933,512 + 1.1
933,512 - 0.9
933,521 + -1.1
933,523 + 1.2
933,531 - -0.0
933,536 + 1.7
933,649 + -0.3
933,673 - 0.4
933,686 + -0.0
933,704 + -0.3
933,863 + 0.4
934,103 + 0.4
934,743 - 16093 mRNA_7725 0.35 -0.9
934,920 + 16093 mRNA_7725 0.42 -0.4
935,081 - 16093 mRNA_7725 0.49 0.7
935,093 + 16093 mRNA_7725 0.49 -0.5
935,363 + 16093 mRNA_7725 0.60 1.7
935,409 + 16093 mRNA_7725 0.62 0.6
935,889 - 16093 mRNA_7725 0.81 0.1
935,932 - 16093 mRNA_7725 0.83 -0.3
935,936 + 16093 mRNA_7725 0.83 0.8
935,947 + 16093 mRNA_7725 0.83 -0.2
936,278 + 2.8
936,285 + 1.8
936,345 + -0.4
936,665 - -1.4
936,669 + 0.4
936,675 - 0.4
936,718 + -0.6
936,718 - 1.9
936,791 + 0.8
936,793 - 0.9
936,795 - 0.1
936,833 - -0.3
936,834 + -0.5
936,948 - 1.7
936,966 - 2.5
936,978 - 1.1
936,987 - 0.7
937,082 + 0.5
937,108 - -0.4
937,111 - 0.4
937,122 - 2.3
937,153 - -0.3
937,257 - 0.8
937,274 - 0.6
937,291 + 1.1
937,312 - 0.1