Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7698

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7697: 16065 - K00815 TAT tyrosine aminotransferase, at 862467 to 863875 16065 mRNA_7698: 16066 - Hypothetical Protein, at 864285 to 865332 16066 mRNA_7699: 16067 - K11681 SWR1 helicase SWR1, at 865523 to 871227 16067

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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863,402 - 16065 mRNA_7697 0.66 0.1
863,578 - 16065 mRNA_7697 0.79 0.8
863,581 + 16065 mRNA_7697 0.79 -0.2
863,588 + 16065 mRNA_7697 0.80 -0.4
863,664 - 16065 mRNA_7697 0.85 0.5
863,677 + 16065 mRNA_7697 0.86 1.3
863,709 - 16065 mRNA_7697 0.88 0.3
863,710 + 16065 mRNA_7697 0.88 1.7
863,734 + 16065 mRNA_7697 0.90 -0.7
863,974 + 1.2
863,980 + -0.1
863,984 + -0.3
863,996 - 2.5
864,000 + 0.1
864,004 - 1.3
864,017 + 0.7
864,020 - 0.3
864,027 - 0.5
864,033 + 0.5
864,034 - -0.0
864,036 + 0.7
864,060 - 2.3
864,061 + -1.0
864,062 + -0.0
864,076 - 1.6
864,076 - -0.3
864,083 - 1.2
864,086 - -0.8
864,089 + 0.6
864,089 + 1.8
864,118 - 0.2
864,118 - -0.1
864,118 + -3.2
864,235 + 1.8
864,245 + 0.8
864,318 - 0.2
864,361 - 2.7
864,371 - -1.0
864,382 - 3.7
864,794 - 16066 mRNA_7698 0.49 0.6
864,982 + 16066 mRNA_7698 0.67 0.9
865,147 - 16066 mRNA_7698 0.82 0.6
865,147 - 16066 mRNA_7698 0.82 1.5
865,306 + 1.2