Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7697

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7696: 16064 - K11269 CTF18, CHL12 chromosome transmission fidelity protein 18, at 858944 to 862198 16064 mRNA_7697: 16065 - K00815 TAT tyrosine aminotransferase, at 862467 to 863875 16065 mRNA_7698: 16066 - Hypothetical Protein, at 864285 to 865332 16066

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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861,541 + 16064 mRNA_7696 0.80 -0.1
861,592 - 16064 mRNA_7696 0.81 0.3
862,328 - -0.3
862,369 + -0.2
862,372 - 0.2
862,393 - -0.2
862,603 + 0.5
862,674 - 16065 mRNA_7697 0.15 -0.8
862,835 - 16065 mRNA_7697 0.26 1.5
862,855 + 16065 mRNA_7697 0.28 0.3
862,856 - 16065 mRNA_7697 0.28 2.0
862,857 + 16065 mRNA_7697 0.28 0.7
863,128 + 16065 mRNA_7697 0.47 -1.4
863,235 - 16065 mRNA_7697 0.55 0.3
863,282 - 16065 mRNA_7697 0.58 1.0
863,402 - 16065 mRNA_7697 0.66 0.1
863,578 - 16065 mRNA_7697 0.79 0.8
863,581 + 16065 mRNA_7697 0.79 -0.2
863,588 + 16065 mRNA_7697 0.80 -0.4
863,664 - 16065 mRNA_7697 0.85 0.5
863,677 + 16065 mRNA_7697 0.86 1.3
863,709 - 16065 mRNA_7697 0.88 0.3
863,710 + 16065 mRNA_7697 0.88 1.7
863,734 + 16065 mRNA_7697 0.90 -0.7
863,974 + 1.2
863,980 + -0.1
863,984 + -0.3
863,996 - 2.5
864,000 + 0.1
864,004 - 1.3
864,017 + 0.7
864,020 - 0.3
864,027 - 0.5
864,033 + 0.5
864,034 - -0.0
864,036 + 0.7
864,060 - 2.3
864,061 + -1.0
864,062 + -0.0
864,076 - 1.6
864,076 - -0.3
864,083 - 1.2
864,086 - -0.8
864,089 + 0.6
864,089 + 1.8
864,118 - 0.2
864,118 - -0.1
864,118 + -3.2
864,235 + 1.8
864,245 + 0.8
864,318 - 0.2
864,361 - 2.7
864,371 - -1.0
864,382 - 3.7
864,794 - 16066 mRNA_7698 0.49 0.6