Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7696

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7696: 16064 - K11269 CTF18, CHL12 chromosome transmission fidelity protein 18, at 858944 to 862198 16064 mRNA_7697: 16065 - K00815 TAT tyrosine aminotransferase, at 862467 to 863875 16065

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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857,961 - 0.1
857,963 - 0.2
858,060 - 0.2
858,071 - 0.6
858,073 + 0.5
858,074 - 1.1
858,082 - 0.7
858,529 + 0.9
858,667 - 1.2
858,740 + -0.2
858,921 + 2.8
859,097 - -1.9
859,401 + 16064 mRNA_7696 0.14 1.2
860,107 - 16064 mRNA_7696 0.36 0.9
860,120 - 16064 mRNA_7696 0.36 -1.0
860,126 + 16064 mRNA_7696 0.36 2.3
860,729 + 16064 mRNA_7696 0.55 -2.2
860,736 - 16064 mRNA_7696 0.55 1.7
860,921 + 16064 mRNA_7696 0.61 1.3
861,005 + 16064 mRNA_7696 0.63 -0.1
861,008 + 16064 mRNA_7696 0.63 3.0
861,263 + 16064 mRNA_7696 0.71 -1.5
861,299 - 16064 mRNA_7696 0.72 0.5
861,310 + 16064 mRNA_7696 0.73 -2.0
861,541 + 16064 mRNA_7696 0.80 -0.1
861,592 - 16064 mRNA_7696 0.81 0.3
862,328 - -0.3
862,369 + -0.2
862,372 - 0.2
862,393 - -0.2
862,603 + 0.5
862,674 - 16065 mRNA_7697 0.15 -0.8
862,835 - 16065 mRNA_7697 0.26 1.5
862,855 + 16065 mRNA_7697 0.28 0.3
862,856 - 16065 mRNA_7697 0.28 2.0
862,857 + 16065 mRNA_7697 0.28 0.7
863,128 + 16065 mRNA_7697 0.47 -1.4