Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7688

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7687: 16055 - SUPERFAMILY--SSF48371, at 838504 to 840672 16055 mRNA_7688: 16056 - Hypothetical Protein, at 840776 to 844586 16056 mRNA_7689: 16057 - BLAST triacylglycerol lipase [Pochonia chlamydosporia 170], at 844796 to 845727 16057

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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839,776 - 16055 mRNA_7687 0.59 0.8
839,893 - 16055 mRNA_7687 0.64 1.7
839,893 - 16055 mRNA_7687 0.64 -0.4
839,901 + 16055 mRNA_7687 0.64 1.9
839,966 - 16055 mRNA_7687 0.67 -0.3
839,988 + 16055 mRNA_7687 0.68 3.1
840,006 - 16055 mRNA_7687 0.69 1.0
840,297 - 16055 mRNA_7687 0.83 -1.8
840,337 + 16055 mRNA_7687 0.85 0.5
840,619 - 1.6
840,623 - 0.8
840,623 - -0.1
840,624 + 0.2
840,626 - -0.4
840,627 + -0.9
840,774 + 2.9
840,781 + 0.3
840,883 - 2.0
840,920 + 0.7
841,048 - 0.9
841,217 - 16056 mRNA_7688 0.12 0.2
841,329 - 16056 mRNA_7688 0.15 -1.8
841,364 - 16056 mRNA_7688 0.15 0.9
841,503 - 16056 mRNA_7688 0.19 -0.6
841,542 - 16056 mRNA_7688 0.20 2.4
841,604 + 16056 mRNA_7688 0.22 0.9
841,651 + 16056 mRNA_7688 0.23 0.3
841,661 - 16056 mRNA_7688 0.23 0.8
841,678 + 16056 mRNA_7688 0.24 -1.8
841,708 - 16056 mRNA_7688 0.24 -1.3
841,776 - 16056 mRNA_7688 0.26 1.2
841,776 - 16056 mRNA_7688 0.26 0.4
841,841 + 16056 mRNA_7688 0.28 0.5
841,925 - 16056 mRNA_7688 0.30 2.0
841,940 + 16056 mRNA_7688 0.31 0.1
842,047 - 16056 mRNA_7688 0.33 0.1
842,047 - 16056 mRNA_7688 0.33 1.1
842,213 - 16056 mRNA_7688 0.38 0.6
842,221 - 16056 mRNA_7688 0.38 -0.6
842,356 - 16056 mRNA_7688 0.41 0.8
842,514 - 16056 mRNA_7688 0.46 0.4
842,539 - 16056 mRNA_7688 0.46 -0.0
842,660 - 16056 mRNA_7688 0.49 3.0
842,678 - 16056 mRNA_7688 0.50 -0.4
842,834 - 16056 mRNA_7688 0.54 -0.7
842,855 + 16056 mRNA_7688 0.55 -0.4
842,917 - 16056 mRNA_7688 0.56 -1.7
842,987 + 16056 mRNA_7688 0.58 0.1
843,062 + 16056 mRNA_7688 0.60 -0.0
843,097 - 16056 mRNA_7688 0.61 0.7
843,139 + 16056 mRNA_7688 0.62 -2.0
843,139 + 16056 mRNA_7688 0.62 -0.2
843,139 + 16056 mRNA_7688 0.62 0.1
843,238 + 16056 mRNA_7688 0.65 0.9
843,257 + 16056 mRNA_7688 0.65 -0.3
843,676 - 16056 mRNA_7688 0.76 0.8
843,717 + 16056 mRNA_7688 0.77 2.2
843,731 - 16056 mRNA_7688 0.78 -0.5
843,773 - 16056 mRNA_7688 0.79 1.9
843,795 - 16056 mRNA_7688 0.79 -0.8
843,801 - 16056 mRNA_7688 0.79 -1.8
843,878 + 16056 mRNA_7688 0.81 0.5
843,993 + 16056 mRNA_7688 0.84 1.4
844,075 - 16056 mRNA_7688 0.87 -1.7
844,197 - 16056 mRNA_7688 0.90 0.2
844,237 - -2.0
844,516 + -0.6
844,521 - -0.1
844,585 + -0.6
844,592 - -0.0
844,713 - 0.5
845,021 + 16057 mRNA_7689 0.24 -1.2
845,154 + 16057 mRNA_7689 0.38 0.2
845,157 - 16057 mRNA_7689 0.39 1.7
845,281 + 16057 mRNA_7689 0.52 -0.1
845,370 - 16057 mRNA_7689 0.62 0.5
845,373 - 16057 mRNA_7689 0.62 -0.7
845,510 - 16057 mRNA_7689 0.77 -0.9
845,586 + 16057 mRNA_7689 0.85 -0.7