Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7672

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7671: 16039 - SUPERFAMILY--SSF56112, at 807629 to 808363 16039 mRNA_7672: 16040 - Hypothetical Protein, at 808491 to 811190 16040 mRNA_7673: 16041 - K14778 DDX49, DBP8 ATP-dependent RNA helicase DDX49/DBP8, at 811508 to 813410 16041

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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807,643 - -0.3
807,645 + -0.7
808,142 - 16039 mRNA_7671 0.70 1.1
808,511 - -0.1
808,586 - 1.6
808,646 + 0.4
808,774 - 16040 mRNA_7672 0.10 0.3
809,241 + 16040 mRNA_7672 0.28 -0.2
809,609 + 16040 mRNA_7672 0.41 2.0
809,632 + 16040 mRNA_7672 0.42 0.2
809,701 + 16040 mRNA_7672 0.45 -0.8
809,708 - 16040 mRNA_7672 0.45 0.8
809,823 - 16040 mRNA_7672 0.49 -1.2
809,913 - 16040 mRNA_7672 0.53 0.6
809,926 + 16040 mRNA_7672 0.53 0.2
809,946 - 16040 mRNA_7672 0.54 -1.1
810,384 + 16040 mRNA_7672 0.70 -0.3
810,687 + 16040 mRNA_7672 0.81 0.6
810,690 - 16040 mRNA_7672 0.81 0.8
810,696 - 16040 mRNA_7672 0.82 1.6
810,832 - 16040 mRNA_7672 0.87 1.0
811,025 + -1.2
811,076 + 0.2
811,085 - -0.8
811,138 + 3.0
811,272 - -0.4
811,272 - 1.2
811,458 - 1.7