Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7663

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7662: 16030 - K13519 LPT1, ALE1 lysophospholipid acyltransferase, at 788706 to 790925 16030 mRNA_7663: 16031 - K03305 TC.POT proton-dependent oligopeptide transporter, POT family, at 791381 to 793587 16031

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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790,402 - 16030 mRNA_7662 0.76 0.9
790,975 - 1.0
790,988 - -0.2
790,990 + 1.5
790,993 - -0.5
790,995 - -0.1
791,015 - 0.2
791,036 + -1.0
791,092 - 0.1
791,131 - 0.7
791,133 + -0.1
791,151 + 2.0
791,156 + 0.3
791,193 - -0.2
791,199 - -2.8
791,212 + 0.5
791,286 + -3.0
791,290 - -1.6
791,295 + 0.1
791,295 + -0.2
791,312 + -0.3
791,315 - -0.4
791,335 - -0.2
791,339 - 1.3
791,431 + 0.2
791,444 + 0.2
791,446 + 0.1
791,447 - 0.0
791,475 + 0.1
791,760 + 16031 mRNA_7663 0.17 1.7
791,851 + 16031 mRNA_7663 0.21 -2.4
791,990 - 16031 mRNA_7663 0.28 -1.9
792,109 + 16031 mRNA_7663 0.33 0.7
792,184 + 16031 mRNA_7663 0.36 -0.1
792,554 + 16031 mRNA_7663 0.53 -1.0
792,903 - 16031 mRNA_7663 0.69 0.1
793,070 + 16031 mRNA_7663 0.77 0.9
793,071 - 16031 mRNA_7663 0.77 0.3
793,126 - 16031 mRNA_7663 0.79 0.0
793,222 + 16031 mRNA_7663 0.83 -0.1
793,297 - 16031 mRNA_7663 0.87 -0.2
793,402 - -0.7
793,452 + 0.2
793,610 + 0.2
793,657 - -0.7
793,690 - -0.2
793,709 - -1.3
793,759 - 2.1
793,769 + -0.1
793,774 - 1.2
793,787 - 0.8
793,795 - 0.7
793,832 + -0.9
793,917 + 1.5
793,919 - -0.2
793,929 + -0.0
793,930 - -0.5
793,936 + 4.1
793,936 - -1.0
793,939 + -0.6
793,940 + -1.1
793,941 + 0.7
793,941 + 1.6
793,948 - 0.1
793,955 - 1.4
793,957 - -1.6
793,960 + -1.4
793,963 - 1.9
793,968 - -1.4
793,977 - 0.3
793,994 + -1.2
794,005 + -2.6
794,006 - 0.0
794,008 - 1.4
794,009 + -1.5
794,034 + 0.9
794,035 + -0.6
794,037 + -0.5
794,053 + 1.2
794,058 + -0.9
794,071 - -1.7
794,074 + 2.2
794,077 - 2.2
794,078 + -0.9
794,081 + 0.4
794,082 + -0.6
794,093 - 1.2
794,096 - -1.2
794,098 - 0.5
794,104 + -0.1
794,105 - -0.5
794,115 + 1.2
794,117 + 1.8
794,122 - -1.7
794,122 - 0.5
794,123 - 2.4
794,127 - 0.0
794,130 + 0.1
794,134 + -0.2
794,135 - 0.1
794,136 - -0.5
794,138 + -0.2
794,141 + -0.2
794,152 - 0.2
794,155 + -0.3
794,161 + -0.9
794,162 - 0.6
794,164 - 0.4
794,164 - 2.1
794,165 - 1.7
794,167 - 0.5
794,168 + 0.1
794,174 + -2.1
794,175 + 1.9
794,177 - 0.4
794,177 + -0.2
794,179 - 1.0
794,180 - 0.3
794,180 - 0.5
794,182 + 0.2
794,184 + 0.8
794,185 + -0.0
794,185 - 0.3
794,186 + -0.6
794,187 - 1.6
794,187 - -2.4
794,202 - 0.4
794,203 + -1.6
794,203 + 0.6
794,203 - 2.0
794,204 + 0.7
794,206 + -0.8
794,209 + -0.1
794,210 - 0.5
794,223 - -0.3
794,227 - 1.2
794,227 + 2.1
794,229 + 1.0
794,230 - 1.0
794,233 + 0.2
794,233 - -0.4
794,236 - -1.7
794,237 + 0.2
794,238 + -0.2
794,240 - 1.3
794,245 - -0.8
794,245 - 1.0
794,248 + -1.7
794,248 - 1.2
794,252 - 1.6
794,253 - -0.2
794,259 - -0.8
794,259 + 0.9
794,261 + -0.5
794,262 + 2.1
794,265 + 1.9
794,267 - -0.0
794,278 - -0.2
794,281 - 2.9
794,283 + 0.8
794,292 + -1.2
794,372 + 1.5
794,396 + -0.8
794,418 + -1.0
794,422 + 0.3
794,427 + 0.2
794,447 + 1.0
794,453 - 1.0
794,459 + -0.3
794,496 - -0.5
794,517 - -0.2
794,521 - -0.5
794,525 + -0.1
794,529 + 1.1
794,542 - -0.1
794,555 + -0.2
794,556 + -0.7
794,558 + 0.2
794,561 - 0.3
794,563 + 1.5
794,568 + 0.9
794,575 + 1.0
794,576 - 0.5
794,578 - -0.2