Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7658

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7657: 16025 - KOG2743 Cobalamin synthesis protein, at 781222 to 782891 16025 mRNA_7658: 16026 - KOG1398 Uncharacterized conserved protein, at 783062 to 785466 16026 mRNA_7659: 16027 - BLAST acetylornithine transaminase [Moesziomyces antarc..., at 785561 to 786043 16027

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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782,462 - 16025 mRNA_7657 0.74 -1.3
782,911 - 0.1
783,298 + 2.6
783,563 + 16026 mRNA_7658 0.21 0.8
783,619 - 16026 mRNA_7658 0.23 -0.1
783,766 - 16026 mRNA_7658 0.29 -0.5
783,956 + 16026 mRNA_7658 0.37 0.5
784,236 + 16026 mRNA_7658 0.49 1.0
784,648 - 16026 mRNA_7658 0.66 1.4
784,902 - 16026 mRNA_7658 0.77 0.6
785,080 + 16026 mRNA_7658 0.84 0.7
785,080 + 16026 mRNA_7658 0.84 -1.6
785,096 - 16026 mRNA_7658 0.85 -0.2
785,189 - 16026 mRNA_7658 0.88 2.1
785,223 - 16026 mRNA_7658 0.90 -2.3
785,369 + -1.0
785,371 + 1.9
785,376 + 0.2
785,380 - 1.8
785,382 - -0.5
785,525 + -0.9
785,540 - 2.1
785,542 + 1.3
785,562 + 1.8
785,692 - 16027 mRNA_7659 0.27 0.3
785,842 - 16027 mRNA_7659 0.58 0.0
785,968 - 16027 mRNA_7659 0.84 1.1
786,118 - 0.8
786,245 - 0.9
786,265 + 0.7
786,292 + 0.4
786,337 - 0.1