Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7647

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7646: 16014 - Hypothetical Protein, at 757554 to 759024 16014 mRNA_7647: 16015 - KOG2741 Dimeric dihydrodiol dehydrogenase, at 759091 to 760573 16015 mRNA_7648: 16016 - K01705 LYS4 homoaconitate hydratase, at 761221 to 763593 16016

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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758,380 + 16014 mRNA_7646 0.56 -0.8
758,414 + 16014 mRNA_7646 0.58 1.2
758,432 + 16014 mRNA_7646 0.60 0.4
758,541 - 16014 mRNA_7646 0.67 -2.4
758,593 + 16014 mRNA_7646 0.71 -0.5
758,598 + 16014 mRNA_7646 0.71 0.5
758,708 + 16014 mRNA_7646 0.78 -2.0
758,848 + 16014 mRNA_7646 0.88 -1.6
758,972 - 0.1
759,154 - 3.4
759,310 + 16015 mRNA_7647 0.15 2.1
759,447 + 16015 mRNA_7647 0.24 1.2
759,730 - 16015 mRNA_7647 0.43 0.8
759,920 - 16015 mRNA_7647 0.56 0.8
760,731 - 0.7
760,743 + -0.4
760,765 + 0.2
760,769 - -0.5
761,026 - 0.5
761,039 + -1.7
761,055 + -0.3
761,188 - -0.6
761,188 - -0.5
761,480 - 16016 mRNA_7648 0.11 0.8
761,489 + 16016 mRNA_7648 0.11 -0.4