Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7646

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7645: 16013 - K04794 PTH2 peptidyl-tRNA hydrolase, PTH2 family, at 756752 to 757515 16013 mRNA_7646: 16014 - Hypothetical Protein, at 757554 to 759024 16014 mRNA_7647: 16015 - KOG2741 Dimeric dihydrodiol dehydrogenase, at 759091 to 760573 16015

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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756,632 + 1.1
757,519 - 0.1
757,671 + 1.9
757,822 + 16014 mRNA_7646 0.18 -0.9
757,964 - 16014 mRNA_7646 0.28 0.3
758,380 + 16014 mRNA_7646 0.56 -0.8
758,414 + 16014 mRNA_7646 0.58 1.2
758,432 + 16014 mRNA_7646 0.60 0.4
758,541 - 16014 mRNA_7646 0.67 -2.4
758,593 + 16014 mRNA_7646 0.71 -0.5
758,598 + 16014 mRNA_7646 0.71 0.5
758,708 + 16014 mRNA_7646 0.78 -2.0
758,848 + 16014 mRNA_7646 0.88 -1.6
758,972 - 0.1
759,154 - 3.4
759,310 + 16015 mRNA_7647 0.15 2.1
759,447 + 16015 mRNA_7647 0.24 1.2
759,730 - 16015 mRNA_7647 0.43 0.8
759,920 - 16015 mRNA_7647 0.56 0.8