Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7629

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7628: 15996 - KOG1721 FOG Zn-finger, at 712863 to 715455 15996 mRNA_7629: 15997 - K20474 RINT1, TIP20 RAD50-interacting protein 1, at 715585 to 720215 15997 mRNA_7630: 15998 - K11353 NDUFA13 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13, at 720321 to 721070 15998 mRNA_7631: 15999 - KOG0226 RNA-binding proteins, at 721192 to 722141 15999

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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715,056 + 15996 mRNA_7628 0.85 -0.7
715,064 - 15996 mRNA_7628 0.85 -0.4
715,071 + 15996 mRNA_7628 0.85 -1.6
715,507 - -0.3
715,509 - 2.3
715,514 - 0.4
716,244 + 15997 mRNA_7629 0.14 -0.1
716,245 + 15997 mRNA_7629 0.14 -0.4
716,253 + 15997 mRNA_7629 0.14 0.5
718,721 - 15997 mRNA_7629 0.68 0.6
718,890 - 15997 mRNA_7629 0.71 -0.2
718,902 - 15997 mRNA_7629 0.72 0.5
719,046 + 15997 mRNA_7629 0.75 -2.1
719,067 + 15997 mRNA_7629 0.75 -0.1
719,197 - 15997 mRNA_7629 0.78 0.3
719,248 + 15997 mRNA_7629 0.79 -0.2
719,353 + 15997 mRNA_7629 0.81 0.3
719,472 - 15997 mRNA_7629 0.84 -0.1
719,642 + 15997 mRNA_7629 0.88 3.6
719,743 + 15997 mRNA_7629 0.90 1.1
720,237 + 0.5
720,348 - 0.3
721,102 + 0.5
721,113 - 3.0
721,113 - -0.8
721,124 + 0.5
721,133 - 0.1
721,136 + 0.5
721,146 - 1.9