Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7612

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7611: 15979 - KOG4779 Predicted membrane protein, at 671733 to 672150 15979 mRNA_7612: 15980 - Hypothetical Protein, at 672701 to 674569 15980 mRNA_7613: 15981 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 674825 to 677007 15981

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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672,336 + -1.4
672,338 + 2.1
672,342 + -0.7
672,476 + 0.2
672,480 + -0.1
672,483 + 0.9
672,484 - 1.0
672,493 - 0.1
672,593 - 1.5
672,596 - 1.3
672,614 - -1.5
672,620 - -0.0
672,620 + 0.1
672,628 - -0.2
672,760 - -0.6
672,894 - 15980 mRNA_7612 0.10 -0.0
673,031 + 15980 mRNA_7612 0.18 -1.5
673,077 + 15980 mRNA_7612 0.20 0.9
673,217 + 15980 mRNA_7612 0.28 2.6
673,258 + 15980 mRNA_7612 0.30 0.9
673,790 + 15980 mRNA_7612 0.58 2.5
674,664 - 0.5
674,973 - -0.5
675,008 + 2.4
675,131 - 15981 mRNA_7613 0.14 1.7
675,166 + 15981 mRNA_7613 0.16 0.5
675,182 - 15981 mRNA_7613 0.16 -0.1