Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7604

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7603: 15971 - SUPERFAMILY--SSF54427, at 660276 to 661317 15971 mRNA_7604: 15972 - K09549 PFDN2 prefoldin subunit 2, at 661569 to 662288 15972 mRNA_7605: 15973 - K03941 NDUFS8 NADH dehydrogenase (ubiquinone) Fe-S protein 8, at 662538 to 663838 15973

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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660,685 + 15971 mRNA_7603 0.39 0.4
660,988 - 15971 mRNA_7603 0.68 -0.2
660,998 + 15971 mRNA_7603 0.69 1.0
661,002 - 15971 mRNA_7603 0.70 0.2
661,126 - 15971 mRNA_7603 0.82 -0.3
661,129 + 15971 mRNA_7603 0.82 -0.9
661,134 + 15971 mRNA_7603 0.82 1.5
661,149 - 15971 mRNA_7603 0.84 1.9
661,160 - 15971 mRNA_7603 0.85 -2.0
661,291 - 0.6
661,315 + -0.0
661,574 - -1.4
661,614 + 1.0
662,161 - 15972 mRNA_7604 0.82 0.1
662,288 - -0.7
662,307 - 1.9
662,309 + 0.2
662,323 + 0.4
662,325 - 1.3
662,332 + 0.4
662,440 - -0.8
662,446 + 0.4
662,453 - -0.5
662,458 - 0.3
662,460 + -0.2
662,463 + 0.1
662,479 + 0.5
662,483 + -0.5