Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7597

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7596: 15964 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 647163 to 648088 15964 mRNA_7597: 15965 - Hypothetical Protein, at 648262 to 649679 15965 mRNA_7598: 15966 - K01102 PDP pyruvate dehydrogenase phosphatase, at 649917 to 652257 15966

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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647,267 - 15964 mRNA_7596 0.11 0.5
647,280 + 15964 mRNA_7596 0.13 1.1
647,281 + 15964 mRNA_7596 0.13 -0.8
647,281 - 15964 mRNA_7596 0.13 1.1
647,287 + 15964 mRNA_7596 0.13 0.5
647,441 - 15964 mRNA_7596 0.30 0.3
647,733 + 15964 mRNA_7596 0.62 -1.6
647,767 + 15964 mRNA_7596 0.65 0.7
648,019 + 0.2
648,022 - 0.0
648,036 + -2.0
648,036 + 1.0
648,297 + -0.3
648,324 - 2.5
648,460 + 15965 mRNA_7597 0.14 0.1
648,588 - 15965 mRNA_7597 0.23 1.5
648,883 - 15965 mRNA_7597 0.44 1.2
649,134 - 15965 mRNA_7597 0.61 -0.1
649,274 - 15965 mRNA_7597 0.71 0.3
649,572 - -1.7
649,578 - 0.5
649,579 + 1.2
649,717 + -0.4
649,730 + 1.4
649,873 + 1.3
649,875 - 0.3
650,023 + -0.3
650,187 + 15966 mRNA_7598 0.12 -0.9
650,308 - 15966 mRNA_7598 0.17 1.7
650,322 - 15966 mRNA_7598 0.17 1.3
650,341 + 15966 mRNA_7598 0.18 0.5
650,353 + 15966 mRNA_7598 0.19 1.3
650,622 + 15966 mRNA_7598 0.30 0.1