Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7590

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7589: 15957 - K19785 POF1 nicotinamide-nucleotide adenylyltransferase, at 629580 to 630504 15957 mRNA_7590: 15958 - Hypothetical Protein, at 630587 to 632557 15958 mRNA_7591: 15959 - Hypothetical Protein, at 632641 to 636261 15959

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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629,636 - -0.1
629,776 - 15957 mRNA_7589 0.21 -0.2
629,776 + 15957 mRNA_7589 0.21 -0.5
629,783 - 15957 mRNA_7589 0.22 3.0
629,791 + 15957 mRNA_7589 0.23 -0.0
629,798 + 15957 mRNA_7589 0.24 1.1
629,800 + 15957 mRNA_7589 0.24 -1.8
629,919 - 15957 mRNA_7589 0.37 -1.3
630,363 - 15957 mRNA_7589 0.85 0.9
630,389 + 15957 mRNA_7589 0.87 3.8
630,437 - -0.6
630,842 + 15958 mRNA_7590 0.13 0.7
630,849 - 15958 mRNA_7590 0.13 -0.4
630,909 + 15958 mRNA_7590 0.16 -0.9
631,441 + 15958 mRNA_7590 0.43 1.5
631,832 - 15958 mRNA_7590 0.63 0.5
632,138 - 15958 mRNA_7590 0.79 0.5
632,159 + 15958 mRNA_7590 0.80 -0.6
632,286 - 15958 mRNA_7590 0.86 1.5
632,297 - 15958 mRNA_7590 0.87 1.6
632,313 + 15958 mRNA_7590 0.88 -0.5
632,315 + 15958 mRNA_7590 0.88 -0.9
632,319 + 15958 mRNA_7590 0.88 -2.0
632,370 - 0.4
632,453 + 0.2
632,602 + 1.0
632,621 - 0.5
632,690 - -1.7
632,713 + 2.3
632,758 - 3.0
632,775 + -0.6
632,873 + -1.5
632,876 - 0.1
632,919 + 0.1
632,922 + 1.0
632,963 + -0.4
633,035 - 15959 mRNA_7591 0.11 -0.7
633,047 + 15959 mRNA_7591 0.11 0.9
633,054 - 15959 mRNA_7591 0.11 0.5
633,192 - 15959 mRNA_7591 0.15 0.4
633,201 - 15959 mRNA_7591 0.15 0.4
633,316 + 15959 mRNA_7591 0.19 -0.5
633,321 - 15959 mRNA_7591 0.19 -1.0
633,368 - 15959 mRNA_7591 0.20 -1.7
633,385 + 15959 mRNA_7591 0.21 0.5