Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7582

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7581: 15949 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 611690 to 614027 15949 mRNA_7582: 15950 - KOG2534 DNA polymerase IV (family X), at 614883 to 616136 15950 mRNA_7583: 15951 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 616198 to 617544 15951

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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614,145 - 1.9
614,164 + 0.6
614,309 - 0.1
614,575 + 0.5
614,666 + 1.0
614,915 + -0.2
615,295 + 15950 mRNA_7582 0.33 -0.4
615,725 + 15950 mRNA_7582 0.67 1.1
615,748 + 15950 mRNA_7582 0.69 0.3
615,758 - 15950 mRNA_7582 0.70 0.6
615,765 + 15950 mRNA_7582 0.70 1.7
615,768 - 15950 mRNA_7582 0.71 -1.2
615,775 + 15950 mRNA_7582 0.71 -1.9
616,046 - 1.8
616,199 + 2.1
617,080 + 15951 mRNA_7583 0.65 2.1